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Table 2 Detailed information of SSR loci in different sorghum genomes

From: Multi-genome comprehensive identification of SSR/SV and development of molecular markers database to serve Sorghum bicolor (L.) breeding

Genome

Dinucleotide

Trinucleotide

Tetranucletide

Pentanucletide

Hexanucletide

Heptanucleotide

Density (SSR/Mb)

BTx623

25,393

11,982

5,276

3,205

2,650

208

72.0

BTx642

25,554

14,438

5,450

3,255

2,719

1,031

79.8

Rio

26,501

13,621

5,819

3,228

2,708

793

74.7

RTx430

26,360

13,971

5,613

3,259

2,743

651

80.3

SC187

25,956

14,062

5,692

3,211

2,698

902

79.0

353

34,220

16,848

6,049

3,503

2,770

1,277

91.0

AusTRCF317961

21,555

10,517

4,937

2,740

2,220

214

68.7

IS12661

19,172

10,767

4,858

3,019

2,398

154

68.0

IS19953

27,724

12,557

4,380

3,212

2,741

2,836

93.3

IS3614-3

20,183

11,076

5,013

2,978

2,433

178

69.5

IS8525

25,610

12,520

4,433

3,312

2,835

2,182

93.7

IS929

26,833

11,859

4,573

3,319

2,816

532

90.1

Ji2731

35,775

13,782

5,777

3,395

2,712

280

91.8

PI525695

23,722

10,141

3,327

2,870

2,244

341

95.4

PI532566.chr

19,057

10,186

4,573

2,876

2,270

158

69.9

PI536008.chr

19,767

11,025

5,193

2,934

2,389

216

64.4

R931945-2-2

19,776

10,684

4,790

2,925

2,410

154

71.2

S369-1

27,032

10,041

3,779

2,919

2,438

483

89.1