Skip to main content

Articles

Page 1 of 45

  1. The V. parahaemolyticus pandemic clone, results in the development of gastrointestinal illness in humans. Toxigenic strains of this species are frequently isolated from aquatic habitats and organisms such as moll...

    Authors: Abraham Guerrero, Bruno Gomez-Gil and Marcial Leonardo Lizarraga-Partida

    Citation: BMC Genomic Data 2021 22:38

    Content type: Research article

    Published on:

  2. Transcription factors (TFs) control gene expression by direct binding to regulatory regions of target genes but also by impacting chromatin landscapes and modulating DNA accessibility for other TFs. In recent ...

    Authors: Ritu Mann-Nüttel, Shafaqat Ali, Patrick Petzsch, Karl Köhrer, Judith Alferink and Stefanie Scheu

    Citation: BMC Genomic Data 2021 22:37

    Content type: Research

    Published on:

  3. China is the birthplace of the deer family and the country with the most abundant deer resources. However, at present, China’s deer industry faces the problem that pure sika deer and hybrid deer cannot be easi...

    Authors: Huanhuan Fan, Tianjiao Wang, Yang Li, Huitao Liu, Yimeng Dong, Ranran Zhang, Hongliang Wang, Liyuan Shang and Xiumei Xing

    Citation: BMC Genomic Data 2021 22:35

    Content type: Research

    Published on:

  4. High salinity is a devastating abiotic stresses for crops. To understand the molecular basis of salinity stress in yardlong bean (Vigna unguiculata ssp. sesquipedalis), and to develop robust markers for improving...

    Authors: Hongmei Zhang, Wenjing Xu, Huatao Chen, Jingbin Chen, Xiaoqing Liu, Xin Chen and Shouping Yang

    Citation: BMC Genomic Data 2021 22:34

    Content type: Research

    Published on:

  5. The lymphatic and the blood vasculature are closely related systems that collaborate to ensure the organism’s physiological function. Despite their common developmental origin, they present distinct functional...

    Authors: Luca Ducoli, Saumya Agrawal, Chung-Chau Hon, Jordan A. Ramilowski, Eliane Sibler, Michihira Tagami, Masayoshi Itoh, Naoto Kondo, Imad Abugessaisa, Akira Hasegawa, Takeya Kasukawa, Harukazu Suzuki, Piero Carninci, Jay W. Shin, Michiel J. L. de Hoon and Michael Detmar

    Citation: BMC Genomic Data 2021 22:33

    Content type: Research

    Published on:

  6. Skeletal muscle growth and development are closely associated with the quantity and quality of pork production. We performed a transcriptomic analysis of 12 Longissimus dorsi muscle samples from Tibetan piglets a...

    Authors: Yanping Wang, Jiying Wang, Hongmei Hu, Huaizhong Wang, Cheng Wang, Haichao Lin and Xueyan Zhao

    Citation: BMC Genomic Data 2021 22:32

    Content type: Research article

    Published on:

  7. Tinnitus is an auditory phantom sensation in the absence of an acoustic stimulus, which affects nearly 15% of the population. Excessive noise exposure is one of the main causes of tinnitus. To now, the knowled...

    Authors: Chengyong Xie, Yuguang Niu, Jie Ping, Yahui Wang, Chenning Yang, Yuanfeng Li and Gangqiao Zhou

    Citation: BMC Genomic Data 2021 22:31

    Content type: Research

    Published on:

  8. Preterm birth (< 37 weeks’ gestation) is a common outcome of pregnancy that has been associated with increased risk of cardiovascular disease for women later in life. Little is known about the physiologic mech...

    Authors: Veronica Barcelona, Janitza L. Montalvo-Ortiz, Michelle L. Wright, Sheila T. Nagamatsu, Caitlin Dreisbach, Cindy A. Crusto, Yan V. Sun and Jacquelyn Y. Taylor

    Citation: BMC Genomic Data 2021 22:30

    Content type: Research

    Published on:

  9. 6S RNA is a regulator of cellular transcription that tunes the metabolism of cells. This small non-coding RNA is found in nearly all bacteria and among the most abundant transcripts. Lactic acid bacteria (LAB)...

    Authors: Pablo Gabriel Cataldo, Paul Klemm, Marietta Thüring, Lucila Saavedra, Elvira Maria Hebert, Roland K. Hartmann and Marcus Lechner

    Citation: BMC Genomic Data 2021 22:29

    Content type: Research article

    Published on:

  10. Maize kernel filling, which is closely related to the process of double fertilization and is sensitive to a variety of environmental conditions, is an important component of maize yield determination. Silk is ...

    Authors: Ting Li, Yapeng Wang, Yaqin Shi, Xiaonan Gou, Bingpeng Yang, Jianzhou Qu, Xinghua Zhang, Jiquan Xue and Shutu Xu

    Citation: BMC Genomic Data 2021 22:28

    Content type: Research article

    Published on:

  11. M. morganii is a gram-negative, non-lactose fermenting and an opportunistic pathogen frequently associated with nosocomial infections. Although first isolated in 1906 from a pediatric fecal sample, not many M. mo...

    Authors: Pachi Pulusu Chanakya, Balaram Khamari, Manmath Lama, Arun Sai Kumar Peketi, Prakash Kumar, Valakunja Nagaraja and Eswarappa Pradeep Bulagonda

    Citation: BMC Genomic Data 2021 22:27

    Content type: Data note

    Published on:

  12. Use of genomic information has resulted in an undeniable improvement in prediction accuracies and an increase in genetic gain in animal and plant genetic selection programs in spite of oversimplified assumptio...

    Authors: Ashley S. Ling, El Hamidi Hay, Samuel E. Aggrey and Romdhane Rekaya

    Citation: BMC Genomic Data 2021 22:26

    Content type: Research article

    Published on:

  13. Porcine milk is a complex fluid, containing a myriad of immunological, biochemical, and cellular components, made to satisfy the nutritional requirements of the neonate. Whole milk contains many different cell...

    Authors: Brittney N. Keel, Amanda K. Lindholm-Perry, William T. Oliver, James E. Wells, Shuna A. Jones and Lea A. Rempel

    Citation: BMC Genomic Data 2021 22:25

    Content type: Research article

    Published on:

  14. X chromosome inactivation (XCI) is that one of two chromosomes in mammalian females is silenced during early development of embryos. There has been a statistical measure for the degree of the skewness of XCI f...

    Authors: Bao-Hui Li, Wen-Yi Yu and Ji-Yuan Zhou

    Citation: BMC Genomic Data 2021 22:24

    Content type: Methodology article

    Published on:

  15. MicroRNAs (miRNAs) are short (20–24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRN...

    Authors: Emiel P. C. van der Vorst, Mario A. A. Pepe, Linsey J. F. Peters, Markus Haberbosch, Yvonne Jansen, Ronald Naumann, Georgios T. Stathopoulos, Christian Weber and Kiril Bidzhekov

    Citation: BMC Genomic Data 2021 22:23

    Content type: Research article

    Published on:

    The Correction to this article has been published in BMC Genomic Data 2021 22:36

  16. Fitness consequences of intraspecific genetic admixture can vary from positive to negative depending on the genetic composition of the populations and environmental conditions. Because admixture has potential ...

    Authors: Yeşerin Yıldırım, Anders Forsman and Johanna Sunde

    Citation: BMC Genomic Data 2021 22:22

    Content type: Research

    Published on:

  17. The Chinese Chenghua pig (CHP) is a typical Chinese domestic fatty pig breed with superior meat quality characteristics, while the Yorkshire pig (YP) has the characteristics of fast growth and a high rate of l...

    Authors: Kai Wang, Pingxian Wu, Shujie Wang, Xiang Ji, Dong Chen, Anan Jiang, Weihang Xiao, Yiren Gu, Yanzhi Jiang, Yangshuang Zeng, Xu Xu, Xuewei Li and Guoqing Tang

    Citation: BMC Genomic Data 2021 22:21

    Content type: Research

    Published on:

  18. Most congenital heart defects (CHDs) result from complex interactions among genetic susceptibilities, epigenetic modifications, and maternal environmental exposures. Characterizing the complex relationship bet...

    Authors: Ming Li, Chen Lyu, Manyan Huang, Catherine Do, Benjamin Tycko, Philip J. Lupo, Stewart L. MacLeod, Christopher E. Randolph, Nianjun Liu, John S. Witte and Charlotte A. Hobbs

    Citation: BMC Genomic Data 2021 22:20

    Content type: Research article

    Published on:

  19. Alpinia oxyphylla Miq. is an important edible and medicinal herb, and its dried fruits are widely used in traditional herbal medicine. Flavonoids are one of the main chemical compounds in A. oxyphylla; however, t...

    Authors: Lin Yuan, Kun Pan, Yonghui Li, Bo Yi and Bingmiao Gao

    Citation: BMC Genomic Data 2021 22:19

    Content type: Research article

    Published on:

  20. The discovery of selection signatures has enabled the identification of genomics regions under selective pressure, enhancing knowledge of evolutionary genotype-phenotypes. Sex chromosomes play an important rol...

    Authors: Tao Wang, Meng Zhou, Jing Guo, Yuan-Yuan Guo, Kun Ding, Peng Wang and Zhi-Peng Wang

    Citation: BMC Genomic Data 2021 22:18

    Content type: Research

    Published on:

  21. Hypoxia induced by flooding causes significant losses to crop production almost every year. However, the molecular network of submergence signaling pathway is still poorly understood. According to previous stu...

    Authors: Junlin Zhang, Bao Liu, Yan Song, Yang Chen, Jiao Fu, Jianquan Liu, Tao Ma, Zhenxiang Xi and Huanhuan Liu

    Citation: BMC Genomic Data 2021 22:16

    Content type: Research article

    Published on:

  22. The role of rhizosphere microbiome in supporting plant growth under biotic stress is well documented. Rhizobacteria ward off phytopathogens through various mechanisms including antibiosis. We sought to recover...

    Authors: Opeyemi K. Awolope, Noelle H. O’Driscoll, Alberto Di Salvo and Andrew J. Lamb

    Citation: BMC Genomic Data 2021 22:15

    Content type: Data note

    Published on:

  23. Bioengineering has demonstrated the potential of utilising mesenchymal stem cells (MSCs), growth factors, and mechanical stimuli to treat cartilage defects. However, the underlying genes and pathways are large...

    Authors: Jishizhan Chen, Lidan Chen, Jia Hua and Wenhui Song

    Citation: BMC Genomic Data 2021 22:13

    Content type: Research article

    Published on:

  24. Plant architecture-related traits (e.g., plant height (PH), number of nodes on main stem (NN), branch number (BN) and stem diameter (DI)) and 100-seed weight (100-SW) are important agronomic traits and are clo...

    Authors: Xiaoli Zhang, Wentao Ding, Dong Xue, Xiangnan Li, Yang Zhou, Jiacheng Shen, Jianying Feng, Na Guo, Lijuan Qiu, Han Xing and Jinming Zhao

    Citation: BMC Genomic Data 2021 22:10

    Content type: Research article

    Published on:

  25. Long noncoding RNA (lncRNA) has been identified as important regulator in hypothalamic-pituitary-ovarian axis associated with sheep prolificacy. However, little is known of their expression pattern and potenti...

    Authors: Chunyan Li, Xiaoyun He, Zijun Zhang, Chunhuan Ren and Mingxing Chu

    Citation: BMC Genomic Data 2021 22:9

    Content type: Research article

    Published on:

  26. Next-generation sequencing (NGS) has profoundly changed the approach to genetic/genomic research. Particularly, the clinical utility of NGS in detecting mutations associated with disease risk has contributed t...

    Authors: Takumi Miura, Satoshi Yasuda and Yoji Sato

    Citation: BMC Genomic Data 2021 22:8

    Content type: Methodology article

    Published on:

  27. In the past decade, the brown marmorated stink bug (BMSB), Halyomorpha halys (Hemiptera: Pentatomidae) has caused extensive damage to global agriculture. As a high-risk pest for many countries, including New Zeal...

    Authors: Juncong Yan, Chandan Pal, Diane Anderson, Gábor Vétek, Péter Farkas, Allan Burne, Qing-Hai Fan, Jinping Zhang, Disna N. Gunawardana, Rebijith Kayattukandy Balan, Sherly George and Dongmei Li

    Citation: BMC Genomic Data 2021 22:7

    Content type: Research article

    Published on:

  28. Phosphorus (P), in its orthophosphate form (Pi) is an essential macronutrient for oil palm early growth development in which Pi deficiency could later on be reflected in lower biomass production. Application o...

    Authors: Sze-Ling Kong, Siti Nor Akmar Abdullah, Chai-Ling Ho, Mohamed Hanafi bin Musa and Wan-Chin Yeap

    Citation: BMC Genomic Data 2021 22:6

    Content type: Research article

    Published on:

  29. Multi-parent populations (MPPs) are important resources for studying plant genetic architecture and detecting quantitative trait loci (QTLs). In MPPs, the QTL effects can show various levels of allelic diversi...

    Authors: Vincent Garin, Valentin Wimmer, Dietrich Borchardt, Marcos Malosetti and Fred van Eeuwijk

    Citation: BMC Genomic Data 2021 22:4

    Content type: Research article

    Published on:

  30. Tunisia is considered a secondary center of diversification of durum wheat and has a large number of abandoned old local landraces. An accurate investigation and characterization of the morphological and genet...

    Authors: Maroua Ouaja, Bochra A. Bahri, Lamia Aouini, Sahbi Ferjaoui, Maher Medini, Thierry C. Marcel and Sonia Hamza

    Citation: BMC Genomic Data 2021 22:3

    Content type: Research article

    Published on:

  31. Chrysanthemum morifolium is one of the most economically important and popular floricultural crops in the family Asteraceae. Chrysanthemum flowers vary considerably in terms of colors and shapes. However, the mol...

    Authors: Hua Liu, Chang Luo, Dongliang Chen, Yaqin Wang, Shuang Guo, Xiaoxi Chen, Jingyi Bai, Mingyuan Li, Xinlei Huang, Xi Cheng and Conglin Huang

    Citation: BMC Genomic Data 2021 22:2

    Content type: Research article

    Published on:

  32. Lesion mimics (LMs) are disease-like symptoms that occur randomly on plant green leaves in the absence of pathogens. A previous study showed that LMs are related to enhanced resistance to a broad spectrum of d...

    Authors: Rong Liu, Jing Lu, Shigang Zheng, Mei Du, Chihong Zhang, Minxiu Wang, Yunfang Li, Jiayi Xing, Yu Wu and Lei Zhang

    Citation: BMC Genomic Data 2021 22:1

    Content type: Research article

    Published on:

  33. The New World Screwworm fly (NWS), Cochliomyia hominivorax, is an ectoparasite of warm-blooded animals and a major pest of livestock in parts of South America and the Caribbean where it remains endemic. In North ...

    Authors: Carolina Concha, Ying Yan, Alex Arp, Evelin Quilarque, Agustin Sagel, Adalberto Pérez de León, W. Owen McMillan, Steven Skoda and Maxwell J. Scott

    Citation: BMC Genetics 2020 21(Suppl 2):143

    Content type: Research

    Published on:

    This article is part of a Supplement: Volume 21 Supplement 2

  34. The invasive fly Drosophila suzukii has become an established fruit pest in Europe, the USA, and South America with no effective and safe pest management. Genetic engineering enables the development of transgene-...

    Authors: Hassan M. M. Ahmed, Fabienne Heese and Ernst A. Wimmer

    Citation: BMC Genetics 2020 21(Suppl 2):139

    Content type: Research

    Published on:

    This article is part of a Supplement: Volume 21 Supplement 2

  35. Bactrocera dorsalis is a destructive polyphagous and highly invasive insect pest of tropical and subtropical species of fruit and vegetable crops. The sterile insect technique (SIT) has been used for decades to c...

    Authors: Zhaohui Cai, Qiongyu Guo, Zhichao Yao, Wenping Zheng, Junfei Xie, Shuai Bai and Hongyu Zhang

    Citation: BMC Genetics 2020 21(Suppl 2):138

    Content type: Research

    Published on:

    This article is part of a Supplement: Volume 21 Supplement 2

  36. The hopper hAT-family transposable element isolated from the Oriental fruit fly, Bactrocera dorsalis, is distantly related to both the Drosophila hobo element and the Activator element from maize. The original 31...

    Authors: Alfred M. Handler and Marc F. Schetelig

    Citation: BMC Genetics 2020 21(Suppl 2):137

    Content type: Research

    Published on:

    This article is part of a Supplement: Volume 21 Supplement 2

  37. Anastrepha fraterculus sp. 1 is considered a quarantine pest in several American countries. Since chemical control applied in an integrated pest management program is the only strategy utilized against this pest,...

    Authors: Alejandra Carla Scannapieco, Claudia Alejandra Conte, Máximo Rivarola, Juan Pedro Wulff, Irina Muntaabski, Andrés Ribone, Fabián Milla, Jorge Luis Cladera and Silvia Beatriz Lanzavecchia

    Citation: BMC Genetics 2020 21(Suppl 2):136

    Content type: Research

    Published on:

    This article is part of a Supplement: Volume 21 Supplement 2

  38. The highly polyphagous Queensland fruit fly (Bactrocera tryoni Froggatt) expanded its range substantially during the twentieth century and is now the most economically important insect pest of Australian horticul...

    Authors: Ángel-David Popa-Báez, Siu Fai Lee, Heng Lin Yeap, Shirleen S. Prasad, Michele Schiffer, Roslyn G. Mourant, Cynthia Castro-Vargas, Owain R. Edwards, Phillip W. Taylor and John G. Oakeshott

    Citation: BMC Genetics 2020 21(Suppl 2):135

    Content type: Research

    Published on:

    This article is part of a Supplement: Volume 21 Supplement 2

  39. Area-wide integrated pest management programs (AW-IPM) incorporating sterile insect technique (SIT) have been successful in suppressing populations of different fruit fly species during the last six decades. I...

    Authors: José S. Meza, Kostas Bourtzis, Antigone Zacharopoulou, Angeliki Gariou-Papalexiou and Carlos Cáceres

    Citation: BMC Genetics 2020 21(Suppl 2):134

    Content type: Research

    Published on:

    This article is part of a Supplement: Volume 21 Supplement 2

  40. Bactrocera tryoni and Bactrocera neohumeralis mate asynchronously; the former mates exclusively around dusk while the latter mates during the day. The two species also differ in the colour of the post-pronotal lo...

    Authors: Heng Lin Yeap, Siu Fai Lee, Freya Robinson, Roslyn G. Mourant, John A. Sved, Marianne Frommer, Alexie Papanicolaou, Owain R. Edwards and John G. Oakeshott

    Citation: BMC Genetics 2020 21(Suppl 2):132

    Content type: Research

    Published on:

    This article is part of a Supplement: Volume 21 Supplement 2

  41. A genetic sexing strain (GSS) is an essential component for pest control using the sterile insect technique (SIT). A GSS is developed using a combination of Y-autosome translocation and a selectable marker suc...

    Authors: Nidchaya Aketarawong, Siriwan Isasawin, Kamoltip Laohakieat and Sujinda Thanaphum

    Citation: BMC Genetics 2020 21(Suppl 2):131

    Content type: Research

    Published on:

    This article is part of a Supplement: Volume 21 Supplement 2

  42. The Oriental fruit fly, Bactrocera dorsalis, is a highly polyphagous invasive species with a high reproductive potential. In many tropical and subtropical parts of the world it ranks as one of the major pests of ...

    Authors: Davide Carraretto, Nidchaya Aketarawong, Alessandro Di Cosimo, Mosè Manni, Francesca Scolari, Federica Valerio, Anna R. Malacrida, Ludvik M. Gomulski and Giuliano Gasperi

    Citation: BMC Genetics 2020 21(Suppl 2):125

    Content type: Research

    Published on:

    This article is part of a Supplement: Volume 21 Supplement 2

Annual Journal Metrics

Announcement

As a result of the significant disruption that is being caused by the COVID-19 pandemic we are very aware that many researchers will have difficulty in meeting the timelines associated with our peer review process during normal times.  Please do let us know if you need additional time. Our systems will continue to remind you of the original timelines but we intend to be highly flexible at this time.