Table 1 Overview of data files/data tables/data sets
Label | Name of data file/data table/data set | File types (file extension) | Data repository and identifier (DOI or accession number) |
|---|---|---|---|
Data Set 1 | Whole exome sequencing (WES) data from 20 patients with suspicious Inborn errors of Immunity (IEI) manifestation | fastq files (.sra) | NCBI/SRA (https://identifiers.org/ncbi/insdc.sra:SRP411987) [9] |
Data Table 1 | Demographic characteristics of the cohort | MS Excel file (.xlsx) | Figshare (https://0-doi-org.brum.beds.ac.uk/10.6084/m9.figshare.21674387) [10] |
Data Set 2 | IEI Exome SNP Discovery | html page (.html) | NCBI/dbSNP (https://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/SNP/snp_viewBatch.cgi?sbid=1063474) [22] |
Data Table 2 | Overview of the sequencing metrics | MS Excel file (.xlsx) | Figshare (https://0-doi-org.brum.beds.ac.uk/10.6084/m9.figshare.21674435) [23] |
Data File 1 | Flowchart of the pipeline used to prioritize genetic variants | Image file (.png) | Figshare (https://0-doi-org.brum.beds.ac.uk/10.6084/m9.figshare.21674495) [25] |
Data Table 3 | Detailed information of the rare and Pathogenic/Likely pathogenic variants found in the cohort | MS Excel file (.xlsx) | Figshare (https://0-doi-org.brum.beds.ac.uk/10.6084/m9.figshare.21674462) [27] |