Pairwise comparative analysis of six haplotype assembly methods based on users’ experience

BMC Genomic Data

Table 1 Webpages and languages used by 6 HA algorithms

Method	Language	Webpage	Version (or Date)
HapCUT2	C, Python	https://github.com/vibansal/HapCUT2	07/2020 installed
MixSIH	C++, Ruby	https://github.com/hmatsu1226/MixSIH https://sites.google.com/site/hmatsu1226/software/mixsih	Version 1.0.0
PEATH	C++	https://github.com/jcna99/PEATH	07/2020 installed
WhatsHap	C++, Python	https://WhatsHap.readthedocs.io/en/latest/index.html	Version 0.18
SDhaP	C	https://sourceforge.net/projects/SDhaP/files/	07/2020 installed
MAtCHap	R, Perl	https://sourceforge.net/projects/MAtCHap/.	Version 1.0

The columns (left to right) represent haplotype assembly method, programming language(s), webpages, and versions (or installation dates)

ISSN: 2730-6844