Table 3 Lists of QTLs identified for adult plant resistance (APR) to wheat stem rust

EWYP1B.1

IWA6489.1

wsnp_Ku_c13229_21142792

T/C

1B

30.34

unknown

0.213439

4.398146

7.14

0.0192

Sr31

Mettin et al., 1973 [27]; Zeller, 1973 [28]

IWB29508

Excalibur_c95327_51

A/G

1B

43.86

9.37986

0.418972

3.000182

5.91

0.0265

EWYP1B.2

IWB29475

Excalibur_c94756_540

T/C

1B

57.6

unknown

0.41502

3.398788

6.63

0.0163

new

IWB1569

BobWhite_c22266_315

C/T

1B

60.62

329.48968

0.213439

4.17831

8.16

0.0050

IWB43258

Kukri_c26168_423

C/A

1B

60.62

1.417758

0.462451

3.07204

6.06

0.0171

EWYP1B.3

IWB23446

Excalibur_c20228_135

A/G

1B

64.1

305.2701

0.094862

3.717446

7.27

0.0130

new

IWB54643

RAC875_c18282_1390

T/C

1B

64.1

unknown

0.090909

3.676459

7.15

0.0171

IWA5592

wsnp_Ex_rep_c69266_68192766

T/C

1B

64.1

299.97785

0.094862

3.668026

7.13

0.0130

IWB6405

BS00011450_51

T/C

1B

64.1

318.23318

0.13834

3.473183

6.74

0.0080

IWA131

wsnp_BE443531B_Ta_1_1

C/T

1B

64.32

156.68751

0.114625

3.490435

6.77

0.0231

IWB48689

Kukri_rep_c101799_95

C/A

1B

64.46

unknown

0.114625

3.490435

6.77

0.0231

IWA3631

wsnp_Ex_c38116_45719983

C/T

1B

64.89

340.37296

0.079051

3.957779

7.72

0.0775

IWB51549

Ra_c23839_884

T/C

1B

65.42

367.44011

0.146245

3.61409

7.02

0.0080

IWB31732

GENE-0193_197

A/G

1B

65.42

367.44095

0.146245

3.471958

6.74

0.0080

IWA6890

wsnp_Ku_c30982_40765254

T/G

1B

66.07

336.20988

0.075099

4.081555

7.97

0.1850

IWB58051

RAC875_c44575_561

C/T

1B

66.07

325.79901

0.075099

3.973875

8.40

0.0266

IWB461

BobWhite_c1318_691

T/C

1B

66.73

387.64464

0.150198

3.618488

7.03

0.0080

IWB37720

JD_c64600_281

G/A

1B

67.14

409.62805

0.893281

3.718149

7.48

0.0208

IWA106

wsnp_BE442716B_Ta_2_1

T/G

1B

67.14

403,156,221

0.102767

3.67975

7.15

0.0208

IWB38394

Ku_c13515_171

C/T

1B

67.14

unknown

0.102767

3.67975

7.15

0.0208

IWB35871

IACX2701

C/T

1B

67.38

413.08886

0.098814

3.795799

7.43

0.0208

IWB10444

BS00070139_51

A/C

1B

68.04

418.16246

0.150198

3.618055

7.03

0.0080

IWB27852

Excalibur_c59016_839

A/G

1B

68.04

426.07288

0.150198

3.618055

7.03

0.0080

IWB56778

RAC875_c32894_1038

C/T

1B

68.04

unknown

0.150198

3.354313

8.83

0.0080

IWB59327

RAC875_c5796_424

A/G

1B

68.04

IWB59327

0.150198

3.618055

7.03

0.0080

IWB8148

BS00038929_51

T/C

1B

68.04

417.85674

0.150198

3.618055

7.03

0.0080

EWYP1B.4

IWB74145

tplb0023b14_704

G:T

1B

70.08

438.2896

0.339921

3.35714

6.59

0.0245

new

IWB47566

Kukri_c73734_175

C/T

1B

76.89

532,565,453

0.213439

4.268153

8.37

0.0282

IWB60433

RAC875_c7674_634

G/A

1B

76.89

532.56545

0.27668

3.545613

7.40

0.0282

IWB6504

BS00011973_51

T/G

1B

76.89

531,855,670

0.280632

3.485333

6.78

0.0282

IWA775

wsnp_CAP11_c543_375403

A/G

1B

76.89

542.43163

0.217391

3.044683

5.89

0.0282

IWA5228

wsnp_Ex_rep_c66389_64588992

A/G

1B

79.77

561.70458

0.110672

3.731492

7.28

0.0080

IWB74900

tplb0048b10_1365

A/G

1B

79.77

552.5332

0.110672

3.731492

7.28

0.0080

EWYP1B.5

IWB10621

BS00072791_51

A/G

1B

105.83

629.26299

0.27668

3.778586

7.61

0.0080

new

IWB70380

Tdurum_contig32775_78

A/G

1B

112.07

unknown

0.335968

3.732007

7.26

0.0080

IWB66198

Tdurum_contig10036_977

C/A

1B

114.13

634.6536

0.094862

3.49178

6.81

0.0080

EWYP3A

IWB73429

Tdurum_contig777_260

G/A

3A

20.74

102.20749

0.339921

3.609065

7.12

0.0080

Sr27

McIntosh et al., 1995 [29]

EWYP3B.1

IWB67769

Tdurum_contig12899_342

T/C

3B

9.7

5.585837

0.379447

3.484232

6.90

0.0210

Sr2

Ausemus et al., 1946 [30]; Knott, 1968 [31]

IWB23457

Excalibur_c20277_483

A/G

3B

9.7

5.58572

0.371542

3.042077

5.88

0.0210

IWB67389

Tdurum_contig12008_803

T/C

3B

9.7

5.584656

0.395257

3.016518

5.83

0.0210

EWYP3B.2

IWB75222

tplb0059m03_622

C/T

3B

20.14

7.373615

0.434783

3.022107

5.95

0.0208

new

EWYP4A

IWB72664

Tdurum_contig59603_74

G/A

4A

26.5

9.92939

0.150198

3.240453

6.40

0.260

new

EWYP4B

IWB24798

Excalibur_c29127_552

G/A

4B

64.58

232.88033

0.094862

3.73037

7.26

0.0208

new

IWB48189

Kukri_c8973_1986

T/C

4B

62.22

Unknown

0.098814

3.126412

4.76

0.073

IWB53758

RAC875_c13639_2159

T/C

4B

62.92

272.17459

0.098814

3.126412

4.76

0.0190

EWYP5B

IWB56412

RAC875_c30011_426

C/T

5B

104.55

571.47521

7.08548

2.9914

5.77

0.0210

Sr56

Park 2016 [32]; Yu et al., 2014 b[33]