Table 4 Six key genomic regions identified by the pairwise comparison
From: Genome-wide DNA methylation analysis in Chinese Chenghua and Yorkshire pigs
Genomic regions | Number of DMRs | Related DMGsa |
|---|---|---|
SSC1:253.47–274.23 Mb | 34 | SNX30, RGS3, ANAK, CDK5RAP2, ADGRD2, RABEPK, FAM102A, DNM1, GPR107, HMCN2, FUBP3, ABL1, FAM163B, NUP214, MED27, AK8, VAV2, OLFM1 |
SSC6:148.71–169.49 Mb | 18 | ROR1, NFIA, DAB1, CDCP2, AGBL4, RAD54L, PRFX1, ERI3 |
SSC7:0.25–9.86 Mb | 26 | EXOC2, GMDS, PSMG4, RPRF4B, CDYL, PHACTR1 |
SSC12:43.06–61.49 Mb | 18 | UTP6, KSR1, SLC13A2, ABR, NXN, WSCD1, ALOX15, CLDN7, MYH8, SLC47A1, RAI1 |
SSC14:126.43–140.95 Mb | 17 | GFRA1, PLPP4, BUB3, DHX32, ADAM12, PTPRE, MGMT, TCERG1L, CFAP46 |
SSC18:49.17–54.54 Mb | 11 | TNS3, CCDC201, ADCY1, NPC1L1, GCK, CAMK2B |