Table 2 Characteristics of most significant single nucleotide polymorphisms (SNPs) in significant regions based on 5 × 10− 8 threshold
Chromosome | SNP | Trait | Position (bp) | Allele substitution effect | S.E. | P-value |
|---|---|---|---|---|---|---|
5 | 5:16795260 | Valeric acid | 16795260 | −1.91 | 0.28 | 3.84e-10 |
25 | 25:37967076 | Valeric acid | 37967076 | −1.30 | 0.22 | 3.42e-08 |
15 | 15:25797132 | PME per kg milk | 25797132 | −22.66 | 3.93 | 5.00e-08 |
4 | 4:115131249 | PME per kg fat | 115131249 | −10183.45 | 1484.85 | 2.14e-10 |
19 | 19:24494923 | PME per kg fat | 24494923 | −13241.11 | 2120.06 | 4.89e-09 |
28 | 28:21771233 | PME per kg fat | 21771233 | − 4709.37 | 811.77 | 4.30e-08 |
13 | 13:81673732 | PME per kg fat | 81673732 | −10135.38 | 1745.10 | 4.17e-08 |