From: Imputation of missing genotypes: an empirical evaluation of IMPUTE
Accuracy | |||||||
---|---|---|---|---|---|---|---|
Population (sample size) | AA (258) | SCA (111) | THAI (104) | NNC (270) | NNC (135) | NECS (280) | |
Complete missing | Overall | 85.66% (0.26,0.75,0.93,1) | 87.39% (0.02,0.77,0.95,1) | 94.23% (0.01,0.86,0.98,1) | 97.05% (0.01,0.92,0.99,1) | 97.06% (0.02,0.93,0.99,1) | 96.43% (0.01,0.91,0.99,1) |
 | 0.95 P.P. | 96.70% (0.00,0.92,0.99,1) | 97.22% (0.00,0.94,1.00,1) | 98.06% (0.00,0.95,1.00,1) | 99.22% (0.00,0.98,1.00,1) | 99.24% (0.00,0.98,1.00,1) | 99.15% (0.00,0.98,1.00,1) |
 | Percentage | 59.00% | 60.77% | 72.56% | 80.38% | 80.40% | 77.43% |
80% missing | Overall | 85.92% (0.29,0.75,0.93,1) | 87.64% (0.01,0.78,0.94,1) | 93.98% (0.01,0.86,0.98,1) | 97.24% (0.01,0.93,0.99,1) | 97.25% (0.01,0.93,0.99,1) | 96.43% (0.01,0.91,0.99,1) |
 | 0.95 P.P. | 96.79% (0.00,0.92,0.99,1) | 97.37% (0.00,0.93,1.00,1) | 98.46% (0.00,0.95,1.00,1) | 99.27% (0.00,0.98,1.00,1) | 99.08% (0.00,0.98,1.00,1) | 99.08% (0.00,0.98,1.00,1) |
 | Percentage | 59.03% | 61.27% | 72.82% | 80.53% | 80.44% | 77.43% |